SubtiBank SubtiBank
yjdB [2019-09-06 10:53:24]
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yjdB [2019-09-06 10:53:24]

unknown
locus
BSU_11990
pI
10.00
mw
12.25 kDa
protein length
115 aa Sequence Blast
gene length
348 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,269,733 1,270,080

    Expression and Regulation

    Operons

    genes
    [gene|890A1723F595FCF252E5E9EA3EE3A73204ADD8C1|yjdB]
    description
    [Pubmed|16291680]

    regulatory mechanism

  • [protein|638D6D2FCCA2A167EFED05CB4E60C2D78D5319AE|PhoP]: activation, [Pubmed|16291680], in [regulon|638D6D2FCCA2A167EFED05CB4E60C2D78D5319AE|PhoP regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • regulation

  • expressed under conditions of phosphate limitation ([protein|search|PhoP]) [Pubmed|16291680]
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    Biological materials

    Mutant

  • MGNA-A263 (yjdB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/263 NBRP B. subtilis, Japan]
  • BKE11990 ([gene|890A1723F595FCF252E5E9EA3EE3A73204ADD8C1|yjdB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAACACTCCTTTA, downstream forward: _UP4_TAATCTTTATCCGCCAGATT
  • BKK11990 ([gene|890A1723F595FCF252E5E9EA3EE3A73204ADD8C1|yjdB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAACACTCCTTTA, downstream forward: _UP4_TAATCTTTATCCGCCAGATT

    • References

  • 16291680,20817675,25666134